MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6024_ses-1_T1w.
  • Date and time: 2022-11-11, 22:03.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5695108241029243
cnr2.337137420535513
efc0.5498897336941491
fber1791.7245261775195
fwhmavg4.189673333333334
fwhmx4.08399
fwhmy4.79324
fwhmz3.69179
icvscsf0.19607115662638872
icvsgm0.432754732002769
icvswm0.3711741113708423
inumed2.095064878463745
inurange0.9851638674736021
qi10.0
qi20.004142991527451975
rpvecsf32.43262886699981
rpvegm15.584195941546895
rpvewm20.62094404040077
sizex176
sizey256
sizez256
snrcsf2.5200733963499835
snrgm11.26836593539796
snrtotal10.82839389211371
snrwm18.696742344593186
snrdcsf31.016409865122426
snrdgm76.8123881776448
snrdtotal68.2411159758554
snrdwm96.89454988479895
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk11.81265204481506
summarybgmad6.76133361150728
summarybgmean12.859621238160187
summarybgmedian11.546671830117702
summarybgn2792881.0
summarybgp054.6089656464755535
summarybgp9525.955753903836012
summarybgstdv7.384205818411467
summarycsfk36.7961614354359
summarycsfmad90.45081932415323
summarycsfmean356.63668094547637
summarycsfmedian320.1047930046916
summarycsfn23492.0
summarycsfp05222.61546649616213
summarycsfp95586.1585478331895
summarycsfstdv127.0193083805386
summarygmk0.2587194263895922
summarygmmad68.47648508675458
summarygmmean792.8087130261072
summarygmmedian792.7420911937952
summarygmn17939.0
summarygmp05679.1092560656369
summarygmp95910.4502222619949
summarygmstdv70.3491526577807
summarywmk0.44575786491712366
summarywmmad49.55913679072889
summarywmmean997.8806441626277
summarywmmedian999.9999990016222
summarywmn167398.0
summarywmp05904.1335135549307
summarywmp951082.0881029367447
summarywmstdv53.48509348169079
tpmoverlapcsf0.1594163030385971
tpmoverlapgm0.4480004906654358
tpmoverlapwm0.48915550112724304
wm2max0.6422417765157554
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime12:04:25.860000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0589768, 0.988857, 0.136686, 0.0234079, 0.138257, -0.99012]
ImageOrientationTextSag>Cor(-3.2)>Tra(-1.8)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0380307
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber14
ShimSetting[2615, 5459, -7524, -104, 17, -849, 243, -259]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp254.699
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum6a9b1742076060b2a1cfd4c4d9f68f44
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.